Showing posts with label prebiotic soup. Show all posts
Showing posts with label prebiotic soup. Show all posts

Sunday, 18 November 2012

Whether Or Not Prebiotic Soup Was Ever Needed/Existed For Origin of Life


Whether Or Not Prebiotic Soup Was Ever Needed/Existed For Origin of Life
Summary: For most of modern theories of Origin of Life, Prebiotic Soup is the starting point and much of the research is focused on this point. However till date not an iota of evidence has been detected in support of existence of Prebiotic Soup at any time in the history of Earth. It is concluded that Prebiotic Soup was neither needed nor existed for Origin of Life on Earth. 

Darwin suggested that life could have begun in a warm little pond with all sorts of ammonia and phosphoric salts, light, heat, electricity present that a protein was formed ready to undergo still more complex changes. At the present day such matter would be instantly devoured or absorbed which would not have been the case before living creatures were formed.
 This gave rise to Primordial Soup Theory which suggests that life began in a pond or ocean as a result of the chemicals from the atmosphere and some form of energy to make amino acids; the building blocks of proteins, which would then evolve into all the species. This is supposed to happen at least 3.8 billion to 3.55 billion years ago.
This involves kaleidoscopic or random permutation and combination of chemicals with eventual selection and accumulation of useful permutations and combinations of chemicals so as to eventually give rise to origin as well as evolution of life.
Alexander Oparin in 1924 suggested the idea of Prebiotic Soup and today this is the starting point for most of modern theories of Origin of Life. Around the same time J.B.S. Haldane suggested that Earth’s Prebiotic oceans are different from today’s oceans – would have formed a hot dilute soup in which organic compounds could have formed. The underlying hypothesis held by Oparin and Haldane was that conditions on the primeval Earth favored chemical reactions that synthesized organic compounds from inorganic precursors. Arguing along the same line it has been speculated that once upon a time there existed organic matter on Earth in sufficient concentration that its spontaneous, kaleidoscopic random interactions ultimately led to Origin of Life. The principal difficulty with this line of thinking is lack of specificity of organic chemical reactions. This is quite unlike chemistry of life i.e. Biochemistry.
 Biochemist Robert Shapiro has summarized the "primordial soup" theory of Oparin and Haldane in its "mature form" as follows
1.   The early Earth had a chemically reducing atmosphere.
2.   This atmosphere, exposed to energy in various forms, produced simple organic compounds ("monomers").
3.   These compounds accumulated in a "soup", which may have been concentrated at various locations (shorelines, oceanic vents etc.).
4.   By further transformation, more complex organic polymers – and ultimately life – developed in the soup.
While steps 1-3 have been basically observed experimentally, step 4 has been criticized as simplistic - a stage of "then magic happens".
However even existence of chemically reducing atmosphere of Early earth has been doubted by geochemists. To quote:
“But is the “prebiotic soup” theory a reasonable explanation for the emergence of life? Contemporary geoscientists tend to doubt that the primitive atmosphere had the highly reducing composition used by Miller in 1953.” http://www.sciencemag.org/content/300/5620/745.full
Even need for step 3 is doubtful since Biological systems show extraordinary capacity to operate under very-very low concentrations of essential chemicals coupled with ability to concentrate essential chemicals as per the requirements of particular Biological Systems.
Since 1924, much work has been done to gather evidence in support of Primordial Soup Theory but till date not an iota of evidence has been discovered supporting Prebiotic Soup hypothesis or existence of Prebiotic Soup.
What has generally been overlooked by scientific community till date is the fact that Biochemistry or Chemistry of life is unique and distinctive to living state. It is totally devoid of randomness. Rather, Biological Systems in order to keep existence can’t permit random chemical reactions. Some of the salient features of Biochemistry are:
(I)                Specificity, accuracy and precision of reactions — unlike organic chemistry in which a large number of side reactions invariably occur during any organic reaction leading to formation of side products, in biochemistry reactions are highly specific, precise and accurate without any side reactions and free from side products. This is essential to avoid chaos in animate matter.
(II)             In biochemistry, all reactions take place under conditions of existence of given organism or conditions of its internal milieu which are often quite different from conditions in which similar inorganic and organic reactions proceed. Rationally speaking biochemical reactions must have originated under the conditions in which relevant organisms are usually found. Because of vast variation in habitat of organisms, the same potentiality is realized through differently structured enzymes effective under different conditions. Therefore, for evolution of Biochemistry, environment has never been an absolute constraint.
(III)           Biochemistry is deterministic. Deterministic character of chemistry of life is well exhibited by its properties such as specificity of intermolecular interactions, chemo selectivity, homochirality, stereo- specificity of biological molecules. Even the subsequent course of events has been essentially deterministic with a strong propensity to stabilization, fixation, preservation and propagation of useful past and present innovations. Biochemistry may have its roots in stochastic inanimate interaction of matter and energy but stochastic organic chemical reactions can’t account for specificity of reactions seen in biochemistry. Unfolding or evolution of biochemistry requires a surprising lack of side reactions (Smith and Morowitz). How this extraordinary specificity of chemical reactions is achieved in the absence of genes giving rise to catalytic polymers with three dimensional substrate pockets is still a matter of conjecture and contemplation.

So the key questions which we must address ourselves keeping in view homochirality of biological molecules are:
(i)                Why homochirality is so essential that it is a deterministic trait in entire biosphere or operates as a matter of law. Does it imply some constraints of molecular intelligence?
(ii)              How this deterministic homochirality was obtained and sustained, may be from a stochastic beginning and in a stochastic world? The answer to this might be simulation and induction, directed by utility.
All the experimental evidence gathered so far to bridge the gap between inanimate matter and animate matter belong to the realm of stochastic chemistry and the reaction products are devoid of life like intelligent molecular activity. This statement is applicable to both, abiotic monomer synthesis as well as abiotic polymer synthesis.
Time line of origin of life shows that it must have taken at least 200 Ma after formation of earth crust and oceans for life to appear. Life might have begun in the form of fossilized Cyanobacteria in Stomatolites which are known to occur as early as 3.85 Ga. Any theory of origin of life should be able to explain time involved in its origin. Therefore various experiments demonstrating synthesis of monomers over a very short period of time fail to explain as to why the time involved in origin of life was of the ~ 200 Ma. Hence, by whatever mechanisms life originated, it must have been very slow and cumulative over a period of time. Therefore the vast amount of experimental evidence only lends credibility to our belief in abiogenesis and that one day it shall be possible to provide detailed explanation of origin of life from inanimate matter but the accumulated evidence is otherwise not sufficient to explain phenomenon of origin of life. Considering the enormous time involved, processes leading to origin of life must be time dependent, extremely lengthy, cumulative, complex and intricate which at the same time are relatively stable, capable of fixation, preservation and propagation so that advances made are cumulative ultimately leading to origin of life. The process of origin of life should have proceeded through accumulation of a series of small discrete steps giving semblance of gradualism and continuity. Easy switching between inanimate behavior and life like activity should have been widely rampant in very-very early stages of origin of life. Vast distribution of life on earth shows that constraints like U.V. Radiation, Toxic effects of atmospheric oxygen against origin of life are just scientific fictions, since a large number of forms that could exist have evolved only after successfully meeting those constraints. Hence, these constraints, even though may be valid are not absolute or non-negotiable. Origin of life must involve origin of ways and means to circumvent and negotiate these constraints or to tolerate these constraints.
Therefore, life like activity began on earth at any point of time in its history when earth was capable of supporting or inducing life like activity due to some unknown cause-effect sequences. All kinds of life like activity began independent of each other wherever a source of energy, little moisture and relevant chemical elements were available even if in very-very minute amounts. Considering ubiquity of life on earth, environmental conditions could not have been a major deterrent. Rather they influenced type of life and life like activity to which every other type of life and life like activity has a relationship of adaptation and adaptability or harmony. Therefore, all life forms originated in such a way that they were ab initio adapted to conditions of their existence. Time and place has played a more significant role in determining type of life like activity and type of life through yet unknown cause-effect sequences. This is in conformity with time dependent increase in complexity of life on earth as per fossil records and place dependent biodiversity. Even Darwin observed that biodiversity on Galapagos Islands varied according to some geographical rule.
Summarizing all above, for Origin of Life neither Prebiotic Soup was ever needed nor could have ever existed. This is in conformity with all the experimental evidence gathered till date.
Author: Dr Mahesh C. Jain is a practicing medical doctor and has written the book “Encounter of Science with Philosophy – A synthetic view”. The book begins with first chapter devoted to scientifically valid concept of God and then explains cosmic phenomena right from origin of nature and universe up to origin of life and evolution of man. The book includes several chapters devoted to auxiliary concepts and social sciences as corollaries to the concept of God. This is the only book which deals with origin of nature and universe from null. Twenty-ninth chapter of the book deals with the subject matter of ‘Origin of Life’.
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Monday, 13 August 2012

How do Planets And Stars Originate


How do Planets And Stars Originate?
Summary: Creation of planets and stars is generally held to be the result of some catastrophe. However, this is not correct. It has to be in accordance with natural laws and one such law is Titus – Bode Law. Every planet and star being a discrete entity can have a characteristic chemical composition.
ORIGIN OF EARTH, ORIGIN OF MOON
Western philosophers and scientists have one thing in common. Both are unanimous in their belief that nature and universe advanced through catastrophes, cataclysms, chaos, upheavals, accidents, random events etc. only because they have no scientific explanation to offer. Even in human society ‘Revolution’ is an attractive slogan as a means to advancement of human society.
Theory of Catastrophism was advanced by Cuvier in 1812 to reconcile geology with Moses account of creation in Genesis in Bible. Cuvier was a great comparative anatomist of 19th century. He appreciated complexities of the process of creation in general and origin of species in particular. To explain origins and creations, he preferred to attribute it to direct intervention of creative powers i.e. Supernatural God.
Darwin likewise attributed biological evolution to accumulation of random variations without ever bothering to explain as to how random variations can account for large number of coordinated variations which accompany origin of species. He out-rightly ignored the collateral issues of identity and integrity of species and varieties that permit only a limited change in any species and variety as a result of variations.
In twentieth century, Physicists attributed origin of universe to Big Bang without ever explaining nature and source of dense matter, only because straight line extrapolation of one particular line of thinking leads to Big Bang. All the irreconcilable differences with collateral evidence and issues were out rightly ignored. No proponent of Big Bang theory has ever bothered to explain as to how the assumed chaos that presumably preceded Big Bang could ever spontaneously (without external intervention) lead to order which is than determined and guided by laws of Physics.       
Theories abound where nature’s creativity is sought to be explained on the basis of Entropy that accompanies each and every irreversible physical and chemical change. In all these theories Entropy was assumed to be directing and driving creations and origins. The question of ‘How’ was out-rightly ignored. These theories never explained as to how Entropy which is nothing but dissipation or decay of thermal energy into universal heat sink, could ever account for creation even if in general. These theorists built elaborate theories but never bothered themselves to explain specificity of creations and origins.
Pre-biotic soup, which must have preceded origin of life and should have led to origin of life in a kaleidoscopic manner through a series of random events, has till date found no evidence in support of its existence. Even theories which postulate extra-terrestrial origin of life and its subsequent plantation on earth, besides being irrational are struggling for evidence in their support.  
 It is pertinent to ask oneself many questions while dealing with the issue of natural origins and creations.
How can chaos ever lead to order without external intervention?
What about self-organizing, self-sustaining character and nature of universe.
What about constancy of natural laws in a universe advancing through catastrophes, cataclysms, chaos, upheavals, accidents, random events etc.?
Why shouldn’t natural laws also keep changing in such a universe?
What about scientific predictions of the past and future in a universe devoid of constant natural laws.
Therefore all acts of natural origin and creation have to be explained with due regard to constancy of natural laws, collateral facts and issues.
Nature can’t advance through cataclysms and catastrophes.
Evolution has to be involution rather than revolution i.e. a change from within rather than a change from without.
Generally speaking all planets and stars and other celestial bodies revolve in stable elliptical orbits. Circular orbits could have been easily explained on the basis of balancing of gravitational force and centrifugal force. But this is not true for elliptical orbits. Stable elliptical orbits involve precise inter-conversion of kinetic energy of the planet into potential energy. Control and regulation of this phenomenon is beyond comprehension on the basis of known laws of Physics.
Therefore, to explain formation of any planet, star and any other celestial body on the basis of some catastrophic, cataclysmic event is clearly farfetched. Concomitant to the said catastrophic, cataclysmic event shall be the issue of their placement in stable elliptical orbits and sustaining them in those elliptical orbits as is the case with artificial satellites. How shall that be managed?    
Planets, stars and other celestial bodies can form only in strict compliance with applicable natural laws and at the same time satisfying all the conditions mandatory to their existence. Therefore their formation as a result of some cataclysm or catastrophe is highly improbable.
Hence in my view planets, stars and other celestial bodies form as a result of condensation of solid dust and gas clouds at specific loci in space. At its specific locus, a celestial body is naturally self-sustaining but how is a matter of further investigation. What natural laws and other factors determine such spatial loci capable of serving as home to celestial bodies is again a matter of further investigation. But one such law already known is Titus - Bode Law.
Under these conditions every celestial body is a discrete entity and may have unique laws of behavior, natural history and chemical composition. Chemical composition of one celestial body may not necessarily be relatable to chemical composition of another. The process of their formation has to be essentially non-catastrophic and non-cataclysmic. However some time in future it may be possible to classify celestial bodies into various types based on similarities of their chemical composition.
Professor Ian Campbell & Hugh O Neil of Australian National University on 29.03.2012 reported to Eagle.com that earth does not have the same chemical composition as Sun implying that earth did not originate from sun.
Junjun Zhang and Colleagues at Origins Lab at University of Chicago reported on 27.03.2012 that chemical composition of moon can’t be explained on the basis of Giant Impact Theory. Visit: http://www.dailygalaxy.com/my_weblog/2012/03/new-evidence-nixes-giant-impact-theory-of-moons-origin.html
Author: Dr Mahesh C. Jain is a practicing medical doctor has written the book “Encounter of Science with Philosophy – A synthetic view”. The book begins with first chapter devoted to scientifically valid concept of God and then explains cosmic phenomena right from origin of nature and universe up to origin of life and evolution of man. The book includes several chapters devoted to auxiliary concepts and social sciences as corollaries to the concept of God. This is the only book which deals with origin of nature and universe from null or Zero or nothing. This article is inspired by author’s understanding of nature.
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